CDS

Accession Number TCMCG066C30066
gbkey CDS
Protein Id XP_034568317.1
Location complement(join(2018516..2018783,2018889..2019187,2019584..2019838,2020088..2020187,2020339..2020427,2020525..2021223))
Gene LOC117833057
GeneID 117833057
Organism Setaria viridis

Protein

Length 569aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034712426.1
Definition DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD/DEAH box helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14811        [VIEW IN KEGG]
ko:K22200        [VIEW IN KEGG]
EC 3.1.3.63        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAAAGGCGACGACGCGTTGGCGCGGAAGCGCAATCGGGTGCGCCGCAAGCGCCTGCGCAGCAGCGAGAACGCCGTCTCCGCGCGGGTCGCGGCAATCATCGCCTCCAAGCGCCGCCGCAAGTCCGGGAAGCGCCGCGGCTGCGAGGGCATGTGCTTCTCGCTCCCCACGCCCGACGACCCCTTCAACGAGCGCCACGGGAAGAAGCGCAAGGGTGAGGAGCCGACCGACGACACAGAAGACGCGGCCGCCGCCGCCACCGTAGCCAAGGACGACAAACCCAAGAAGAAGGACGCGACTAAAAAACAGCCGCCGGCGAAGGCCGGGGCCAAGGCCAAGTCGAAGGATGTACGCGAGCGAGCGACGGAAACGGAAGAGGGCCGCGTGGACTTCGACCGGCCGTCCAAGTTCCTGGTGGTTTGCCTCAACGCCATCCGGGATGCGGTGGCGCCCGAGGACGGCGGCGGCAGCAGCATCCACGGCGCCGGCGACTGGGGCGTGGAGCTCTGGAGGTCCTGCTCCGCCCCGGCGACGTCCGACGTGCTCGACACAAGCGGCGCGTGCGCCACGATGGAGCAGACGGCGTGGCTCGTCTCCACGGCCTGCGACATCGTCGCCAGGAAGGAGAGGCTTGGGATGGTCGTCTCCTGCCCCTTCCTGCTGTACCTCGTCCCGTCCCAGGAGAAGGCCGCGCAGGTGCGATCTATATGCAAACCCTTGAAGCCTCTTGGGATTCATTCAGTGAGCTTGCATCCTGGCGCTTCGGTTGAACATCAGATCTCTGGACTAAAAACTTGTGAGCCGGAGTTTCTTATAGCTACCCCTGAGAGGCTTCTTGAACTTGTTTCACTAAAGGCAATTGACATATCAAATGTATCAATGCTGGTCATTGATGGACTGAAATATTTCCTGGACCTCAATGTTAGTGACAAAATCTTTTCTATTAGAGATGCCATATCAAGCAATCCTCAGATAACTATCTTCACTGACTCATCTGACAAAAATGTTGCAACTATGGTTAAAAATCTACTCCGTGGAAGAATTACAAAGCTCTCTATCAATGATTCGGTTTCTTCAAGGAGTGCTTTTGTAACGCAGCATGTGCATTTCTGTCCATCGGAGAAGCTGAAAACATCAAAGGTCAAGGAAATTCTTGAGCAGATTATGCAGAGTCATGCTAAACAGTCATCAAAGGTTCTGCTAGTAGCAGCAAGCGATAAAAAAGCACAGCACCTATCATCATCACTTAAACTGGAAAATTGCACAGTAACTGATGGCTCACATGGCAACTCTTTTACCATATGCAGCAGGTGCAGTGAACCTAACAACATTGTAGTTTTTTTTTGGCAATTTCCAATATCTTCATGCAGGCTGAACCTTGTGCAGCATCAGCAATTCAGCATGCATAGTTATTTTGTTACTTTAATAACATATTGCAATGTGGGGCTGATGAACCTACATATTAAAGACCGGGAGAACCTGGTGATGACAGATATAGAGGGGTTTGACATTGTGTTGGTTGTTGATTTGCCTCCTTCAGTTGATGAATACAGTGGGATCCTCACTGGGGTTGCTCGTCAGACGATTGGAGGGGAGGTCCATAGTGTCTTTTGTAACACTGATGCTCCTGTTGCGAAACCTTTGGCTGAGCTTCTTGCAAACTGCAGCCAGGTGGTGCCTGAATTTCTCAAAAAATTGGAGTCTTGA
Protein:  
MAKGDDALARKRNRVRRKRLRSSENAVSARVAAIIASKRRRKSGKRRGCEGMCFSLPTPDDPFNERHGKKRKGEEPTDDTEDAAAAATVAKDDKPKKKDATKKQPPAKAGAKAKSKDVRERATETEEGRVDFDRPSKFLVVCLNAIRDAVAPEDGGGSSIHGAGDWGVELWRSCSAPATSDVLDTSGACATMEQTAWLVSTACDIVARKERLGMVVSCPFLLYLVPSQEKAAQVRSICKPLKPLGIHSVSLHPGASVEHQISGLKTCEPEFLIATPERLLELVSLKAIDISNVSMLVIDGLKYFLDLNVSDKIFSIRDAISSNPQITIFTDSSDKNVATMVKNLLRGRITKLSINDSVSSRSAFVTQHVHFCPSEKLKTSKVKEILEQIMQSHAKQSSKVLLVAASDKKAQHLSSSLKLENCTVTDGSHGNSFTICSRCSEPNNIVVFFWQFPISSCRLNLVQHQQFSMHSYFVTLITYCNVGLMNLHIKDRENLVMTDIEGFDIVLVVDLPPSVDEYSGILTGVARQTIGGEVHSVFCNTDAPVAKPLAELLANCSQVVPEFLKKLES